I’m also in Ontario, and mine went to OVC (the other option in this general area is Toronto as cherham posted). He went in one afternoon, they took his history (I went with him for check-in so was able to be very thorough myself) and after I left, they did some initial exams (jogging in hand, lunging, etc). He got scanned the next day and stayed overnight due to the radioactivity. They did some additional procedures so he was there one more night (I don’t have my own trailer so had to arrange for trailering the next day - he could have come home later that same day).
My horse had a hind end NQR that we had already done fairly extensive testing on - blocks from hoof to stifle, two blocks several months apart of the high suspensory (what the vets thought it looked like, but wasn’t), x rays of stifle, ultrasound-guided SI injections (twice). Even with the negative blocks of the suspensory, vet still requested that area be looked at during the brief soft-tissue part of the bone scan (the beginning).
The problem ended up being a soft-tissue injury of an SI ligament. They couldn’t actually definitively diagnose based solely on the bone scan, as it was soft tissue, but given the very thorough history and all of the testing, they were able to eliminate the other possibilities. SI and hocks lit up, the rest of him was clean.
I highly suggest getting the whole body scanned - the cost difference is minimal compared to having to go a second time in case there was something going on at the other end!
One note too - after the scan, you still may need additional tests to figure out the actual problem. The bone scan points the vets in the right direction, but then often they need to do more precise testing like x rays, ultrasound, etc as Tee above explained. In my case, we had already done everything before the scan so the OVC vets were already armed with all of that. Had I not had all of that testing done, they told me they would have had to start at the beginning with blocks to be able to positively identify the issue.